KINFO: Systems Biology lectures

[Marjaana Parikainen]

Dear all,

Master´s Programme in Molecular Systems Biology provides a lecture series in Systems Biology focusing on central omics technologies and basics of bioinformatics and systems biology. The lectures are given by several experts from various fields, departments and universities. The lecture series is suitable for many MS and PhD programmes (discuss with your supervisor), please find attached a schedule for the lectures.

Welcome!

Paula Mulo

Dr. Paula Mulo
Assistant professor
University of Turku
Department of Biochemistry
Molecular Plant Biology
Biocity A, 6th floor
Tykistökatu 6
FI-20520 TURKU
Finland
Tel. +358 2 3337915

Systems Biology lectures SYST1010 2015 6 ECTS
Seminar room of Molecular Plant Biology, Pharmacity B, 6th floor

Attendance to the lectures is obligatory. To pass the course you must attend the lectures, read the book, do the exercises and pass the exam. 1st exam will be on Fri 30th Oct (Seminar room of Molecular Plant Biology) at 10-12 (no registration needed). If you can not attend the 1st exam/you do not pass the 1st exam/you want to improve your grades, you can attend the second exam on 4th Dec at 14-18 (registration via OPSU required) and/or third exam in 2016 (date will be announced later, registration via OPSU required).

1. Model organisms and reverse genetics; Paula Mulo Tue 8 Sept 10-12
2. Genome sequencing, epigenetics; Riikka Lund Thu 10 Sept 10-12
3. RNA techniques I: isolation, Northern, Q-PCR; Paula Mulo, Nina Lehtimäki Fri 11 Sept 10-12
4. DNA/RNA techniques II: DNA microarrays, EMSA, ChIP; Taina Tyystjärvi Tue 15 Sept 10-12
5. RNA techniques III: RNAseq; Riikka Lund Thu 17 Sept 10-12
6. RNA techniques IV: RNAi; Kirsi Lehto Fri 18 Sept 10-12
7. Proteins I: gel-based methods; Natalia Battchikova Tue 22 Sept 10-12
8. Proteins II: mass spectrometry; Natalia Battchikova Thu 24 Sept 10-12
9. Proteins III: proteomics, quantitation, PTMs; Natalia Battchikova Fri 25 Sept 10-12
10. Proteins IV: X-ray crystallography, modeling; Tassos Papageorgiou Tue 29 Sept 10-12
11. Bioimaging; Eleanor Coffey Thu 1 Oct 10-12
12. Chromatography; Jarmo Käpylä Fri 2 Oct 14-16
13. Metabolomics; Tuulia Hyötyläinen Tue 6 Oct 10-12
14. Metagenomics; Eveliina Munukka Thu 8 Oct 10-12
15. Bioinformatics I: Gene function enrichment analysis; Pekka Rappu Fri 9 Oct 10-12
16. Bioinformatics II: Introduction to mathematical modeling 1; Esa Tyystjärvi Tue 13 Oct 10-12
17. Systems Biology I; Statistical data mining for high-throughput data; Laura Elo-Uhlgren Thu 15 Oct 10-12
18. Systems Biology II; Biological network analysis; Laura Elo-Uhlgren Fri 16 Oct 10-12
19. Systems Biology III; Introduction to mathematical modeling 2; Esa Tyystjärvi Tue 20 Oct 10-12
20. Systems Biology IV; Systems biology in practise; Jarkko Salojärvi Thu 22 Oct 10-12
21. 1st Exam Fri 30 Oct 10-12

Book: An Introduction to Molecular Biotechnology. Fundamentals, Methods, and Applications (ed. Michael Wink) Wiley-Blackwell 2011, 2nd ed. Sections 7-24 and 29-32.

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Viestin välitti,
Marjaana Parikainen
Biokemian koulutuspoliittinen vastaava, TYK ry
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